Journal: bioRxiv

Article Title: Comparative genome analysis of tea rhizosphere dwelling Paenarthrobacter nicotinovorans AB444: Uncovering Physiological Resilience and Ecological Adaptability

doi: 10.1101/2025.09.01.673609

Figure Lengend Snippet: Arrangement of mycelium studied by phase contrast microscopy. Phase contrast micrographs of actinomycets Paenarthrobacter sp. Cells were found as rod-shaped with some cell forming v-shaped arrangement. They were found to be motile in nature.

Article Snippet: The Venn diagram in ( ) also demonstrates the overlapping genetic features between the reference organism Paenarthrobacter AB444 (Query organism) and other organisms ( Arthrobacter agilis strain UMCV2, Arthrobacter bambusae DP-A9, Arthrobacter koreensis 5J12A, Arthrobacter ramosus ZX_2022b, Arthrobacter sp. AFG20, Arthrobacter sp. AFG7.2, Arthrobacter sp. ATA002, Arthrobacter sp. Arthrobacter EpRS66, sp. EpRS71, Arthrobacter sp. GN70, Arthrobacter sp. L77, Arthrobacter sp. PGP41, Arthrobacter sp. SPG23, Arthrobacter sp. UKPF54-2, Arthrobacter wenxiniae strain AETb3-4, Paenarthrobacter aurescens Strain NBRC 12136, Paenarthrobacter histidinolovorans JCM 2520, Paenarthrobacter ilicis DSM 20138, Paenarthrobacter nicotinovorans ATCC 49919, Paenarthrobacter nitroguajacolicus 3945, Paenarthrobacter ureafaciens DnL1-1, Pseudarthrobacter chlorophenolicus A6, Pseudarthrobacter chlorophenolicus strain Mor30.16, Pseudarthrobacter humi RMG13, Pseudarthrobacter psychrotolerans YJ56, Pseudarthrobacter siccitoleran s Strain 4J27).

Techniques: Microscopy

Journal: bioRxiv

Article Title: Comparative genome analysis of tea rhizosphere dwelling Paenarthrobacter nicotinovorans AB444: Uncovering Physiological Resilience and Ecological Adaptability

doi: 10.1101/2025.09.01.673609

Figure Lengend Snippet:

Article Snippet: The Venn diagram in ( ) also demonstrates the overlapping genetic features between the reference organism Paenarthrobacter AB444 (Query organism) and other organisms ( Arthrobacter agilis strain UMCV2, Arthrobacter bambusae DP-A9, Arthrobacter koreensis 5J12A, Arthrobacter ramosus ZX_2022b, Arthrobacter sp. AFG20, Arthrobacter sp. AFG7.2, Arthrobacter sp. ATA002, Arthrobacter sp. Arthrobacter EpRS66, sp. EpRS71, Arthrobacter sp. GN70, Arthrobacter sp. L77, Arthrobacter sp. PGP41, Arthrobacter sp. SPG23, Arthrobacter sp. UKPF54-2, Arthrobacter wenxiniae strain AETb3-4, Paenarthrobacter aurescens Strain NBRC 12136, Paenarthrobacter histidinolovorans JCM 2520, Paenarthrobacter ilicis DSM 20138, Paenarthrobacter nicotinovorans ATCC 49919, Paenarthrobacter nitroguajacolicus 3945, Paenarthrobacter ureafaciens DnL1-1, Pseudarthrobacter chlorophenolicus A6, Pseudarthrobacter chlorophenolicus strain Mor30.16, Pseudarthrobacter humi RMG13, Pseudarthrobacter psychrotolerans YJ56, Pseudarthrobacter siccitoleran s Strain 4J27).

Techniques:

Journal: bioRxiv

Article Title: Comparative genome analysis of tea rhizosphere dwelling Paenarthrobacter nicotinovorans AB444: Uncovering Physiological Resilience and Ecological Adaptability

doi: 10.1101/2025.09.01.673609

Figure Lengend Snippet: (a): A dendrogram plot is included to visualize the hierarchical clustering between the groups based on the biosynthetic genes, (b): VIP plot discriminating among the Paenarthrobacter sp , Pseudarthrobacter sp and Arthrobacter sp , (c): Venn Diagram of overlapping genetic features between reference and other selected organisms.

Article Snippet: The Venn diagram in ( ) also demonstrates the overlapping genetic features between the reference organism Paenarthrobacter AB444 (Query organism) and other organisms ( Arthrobacter agilis strain UMCV2, Arthrobacter bambusae DP-A9, Arthrobacter koreensis 5J12A, Arthrobacter ramosus ZX_2022b, Arthrobacter sp. AFG20, Arthrobacter sp. AFG7.2, Arthrobacter sp. ATA002, Arthrobacter sp. Arthrobacter EpRS66, sp. EpRS71, Arthrobacter sp. GN70, Arthrobacter sp. L77, Arthrobacter sp. PGP41, Arthrobacter sp. SPG23, Arthrobacter sp. UKPF54-2, Arthrobacter wenxiniae strain AETb3-4, Paenarthrobacter aurescens Strain NBRC 12136, Paenarthrobacter histidinolovorans JCM 2520, Paenarthrobacter ilicis DSM 20138, Paenarthrobacter nicotinovorans ATCC 49919, Paenarthrobacter nitroguajacolicus 3945, Paenarthrobacter ureafaciens DnL1-1, Pseudarthrobacter chlorophenolicus A6, Pseudarthrobacter chlorophenolicus strain Mor30.16, Pseudarthrobacter humi RMG13, Pseudarthrobacter psychrotolerans YJ56, Pseudarthrobacter siccitoleran s Strain 4J27).

Techniques:

Journal: Heliyon

Article Title: Diversity and functional assessment of indigenous culturable bacteria inhabiting fine-flavor cacao rhizosphere: Uncovering antagonistic potential against Moniliophthora roreri

doi: 10.1016/j.heliyon.2024.e28453

Figure Lengend Snippet: Native culturable bacterial isolates and functional characterization.

Article Snippet: For example, only the strain IA201 was located in a single clade with Sphingobium scionense WP01 and S. yanoikuyae GIFU 9882 at 100% of bootstrap, CB304 was found with Lysobacter cavernae YIM C01544 and L. tabacisoli C8 1 at 99% of bootstrap, CA205 grouped with Paenarthrobacter ilicis DSMZ 20138 at 98% of bootstrap, CA101 grouped with Isoptericola nanjingensis H17 at 100% of bootstrap, CA105 was found grouped with several Cellulosimicrobium strains at 84% of bootstrap and CA305 was found closely related to Sporosarcina thermotolerans CCUG 53480 at 85% of bootstrap.

Techniques: Functional Assay